Bioinformatics Jobs in San Jose, CA
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Bioinformatics • san jose ca
Last updated: 12 days ago
As a Bioinformatics Software Engineer at AccuraGen, you will develop, optimize, and maintain bioinformatics pipelines utilizing AWS infrastructure and Nextflow workflow management systems.Your cont...Show moreLast updated: 12 days ago
As a Bioinformatics Software Engineer at AccuraGen, you will develop, optimize, and maintain bioinformatics pipelines utilizing AWS infrastructure and Nextflow workflow management systems.Your cont...Show moreLast updated: 12 days ago
- Promoted
Bioinformatics Software Engineer
AccuragenSan Jose, California, United StatesFull-time
- Promoted
Bioinformatics Software Engineer
AccuraGenSan Jose, CA, USFull-time
The average salary range is between $ 107,082 and $ 186,190 year , with the average salary hovering around $ 145,735 year .
- american sign language interpreter (from $ 70,941 to $ 551,925 year)
- investment banker (from $ 144,400 to $ 249,600 year)
- cardiothoracic surgeon (from $ 174,600 to $ 248,150 year)
- forensic pathologist (from $ 135,000 to $ 244,941 year)
- director of software engineering (from $ 183,000 to $ 240,000 year)
- psychiatrist (from $ 50,000 to $ 240,000 year)
- radiologist (from $ 57,103 to $ 238,613 year)
- chief investment officer (from $ 155,794 to $ 235,505 year)
- engineering director (from $ 151,059 to $ 235,000 year)
- product director (from $ 164,997 to $ 235,000 year)
- San Jose, CA (from $ 107,082 to $ 186,190 year)
- San Mateo, CA (from $ 107,126 to $ 186,190 year)
- San Diego, CA (from $ 107,323 to $ 186,034 year)
- San Francisco, CA (from $ 108,510 to $ 185,500 year)
- Dallas, TX (from $ 61,327 to $ 165,000 year)
- Atlanta, GA (from $ 127,638 to $ 165,000 year)
- Boston, MA (from $ 106,250 to $ 165,000 year)
- New York, NY (from $ 73,430 to $ 154,800 year)
- Los Angeles, CA (from $ 78,924 to $ 152,880 year)
- Philadelphia, PA (from $ 64,960 to $ 150,440 year)
The average salary range is between $ 79,976 and $ 163,353 year , with the average salary hovering around $ 110,373 year .
Bioinformatics Software Engineer
AccuragenSan Jose, California, United States12 days ago
Job type
- Full-time
Job descriptionBachelor’s degree or higher in Bioinformatics, Computational Biology, Computer Science, or a related field. with at least 3+ years of working experience out of college. Experience with bioinformatics workflow development and optimization, particularly using Nextflow. Experience developing software following best practices, including comprehensive testing and clear documentation. Proficiency in scripting languages (Python, Bash) and familiarity with container technologies (Docker, Kubernetes). Hands-on experience with AWS cloud computing services (EC2, S3, Batch, Lambda). Excellent communication and collaborative skills. Familiarity with CI / CD practices. Experience with infrastructure-as-code (Terraform, CloudFormation). Health Care Plan (Medical, Dental & Vision) Retirement Plan (401k, IRA) Paid Time Off (Vacation, Sick & Public Holidays)
As a Bioinformatics Software Engineer at AccuraGen, you will develop, optimize, and maintain bioinformatics pipelines utilizing AWS infrastructure and Nextflow workflow management systems. Your contributions will directly impact innovative scientific discoveries and product development. You'll collaborate closely with scientists, engineers, and researchers, contributing your technical expertise to streamline processes, maintain automation, and drive our bioinformatics capabilities forward.
Responsibilities :
- Design, implement, and develop tests and documentation for established robust bioinformatics pipelines.
- Optimize computational workflows for high-performance execution and reproducible data analysis.
- Maintain, monitor, and improve pipeline automation to ensure smooth operational workflows.
- Manage GitHub repositories, oversee version control, and streamline the software release process.
- Develop and manage infrastructure on AWS to ensure scalability, reliability, and efficiency.
- Collaborate with cross-functional teams to integrate bioinformatics solutions.
- Proactively identify opportunities to enhance infrastructure efficiency and security.
Qualifications :
Preferred Qualifications :