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Pipeline engineer Jobs in Berkeley, CA

Last updated: 18 hours ago
  • Promoted
Bioinformatics Pipeline Engineer

Bioinformatics Pipeline Engineer

Recruiting from Scratchsan francisco, CA, United States
$155,000.00–$200,000.00 yearly
Full-time
Who is Recruiting from Scratch : .Recruiting from Scratch is a talent firm that focuses on placing the best candidate for our clients. Our team is 100% remote and we work with teams across North Ameri...Show moreLast updated: 9 days ago
  • Promoted
  • New!
ASSEMBLER / PACKER PIPELINE

ASSEMBLER / PACKER PIPELINE

SpherionCA, United States
Full-time
Spherion - JobID : 44898170 [Material Handler / Freight Handler] As an Assembler / Packer at Spherion, you'll : Assemble products according to specifications. Pack items for shipment; Maintain a clean ...Show moreLast updated: 18 hours ago
Technician, Pipeline (Princeton, IN)

Technician, Pipeline (Princeton, IN)

EPCO CorporateOakland City, US
Full-time
Enterprise Products Partners L.North American provider of midstream energy services to producers and consumers of natural gas, NGLs, crude oil, refined products and petrochemicals.Our services incl...Show moreLast updated: 2 days ago
  • New!
Titmouse Inc is hiring : Pipeline Technical Director in Bitch

Titmouse Inc is hiring : Pipeline Technical Director in Bitch

Titmouse IncBitch, CA, United States
$115,000.00–$120,000.00 yearly
Full-time
Are you passionate about developing cutting-edge animation pipelines and optimizing workflows for artists?.In this role, you’ll be responsible for building, maintaining, and enhancing our animation...Show moreLast updated: 22 hours ago
  • Promoted
Bioinformatics Pipeline Engineer

Bioinformatics Pipeline Engineer

Sangha PartnersSan Francisco Bay Area, United States
Full-time
Are you passionate about building scalable bioinformatics pipelines that empower scientists to accelerate groundbreaking research? Our client is a fast-growing biotech company on a mission to revol...Show moreLast updated: 4 days ago
Director, Pipeline Performance

Director, Pipeline Performance

DatabricksSan Francisco, California
Director, Pipeline Performance.Location : San Francisco Bay Area & New York.We are looking for an experienced and driven professional to join our dynamic team as the Director of Pipeline Performance...Show moreLast updated: 30+ days ago
REPORTER - KCBS-AM NEWSROOM PT (Pipeline Position)

REPORTER - KCBS-AM NEWSROOM PT (Pipeline Position)

AudacySan Francisco, CA, United States
$25.00–$61.00 hourly
Full-time
Overview • •Audacy's KCBS All News Radio, The Bay Areas number one news station, is looking for an intrepid and tech-savvy broadcast journalist with a positive attitude and impressive work ethic to j...Show moreLast updated: 7 days ago
Pipeline US-Based Job Search Strategist / Career Coach Part-Time (San Francisco / remote)

Pipeline US-Based Job Search Strategist / Career Coach Part-Time (San Francisco / remote)

IMPACT GroupSan Francisco, CA, US
Remote
Quick Apply
IMPACT Group is a certified woman-owned career coaching firm based in St.Louis, MO that focuses on relocation, outplacement, and leadership development solutions. For over 35 years, our team of 300+...Show moreLast updated: 12 days ago
  • Promoted
Bioinformatics Pipeline Engineer

Bioinformatics Pipeline Engineer

Recruiting From ScratchSan Francisco, CA, US
$155,000.00–$200,000.00 yearly
Full-time
Who is Recruiting from Scratch : .Recruiting from Scratch is a talent firm that focuses on placing the best candidate for our clients. Our team is 100% remote and we work with teams across North Ameri...Show moreLast updated: 1 day ago
  • Promoted
Data Pipeline Engineer

Data Pipeline Engineer

VirtualVocationsOakland, California, United States
Full-time
A company is looking for a Data Pipeline Engineer.Key ResponsibilitiesBuild and maintain a proprietary data pipeline for batch geospatial data processingMonitor and support data pipeline performanc...Show moreLast updated: 14 days ago
  • Promoted
Head, Global Oncology Pipeline, Medical Affairs

Head, Global Oncology Pipeline, Medical Affairs

AbbVieSan Francisco, CA, California, United States
AbbVie's mission is to discover and deliver innovative medicines and solutions that solve serious health issues today and address the medical challenges of tomorrow. We strive to have a remarkable i...Show moreLast updated: 30+ days ago
REPORTER - KCBS-AM NEWSROOM PT (Pipeline Position)

REPORTER - KCBS-AM NEWSROOM PT (Pipeline Position)

MediabistroSan Francisco, CA, United States
$25.00–$61.00 hourly
Full-time
Overview • •Audacy's KCBS All News Radio, The Bay Areas number one news station, is looking for an intrepid and tech-savvy broadcast journalist with a positive attitude and impressive work ethic to j...Show moreLast updated: 30+ days ago
  • Promoted
Senior Pipeline Engineer

Senior Pipeline Engineer

KleinfelderSan Francisco, CA, US
Full-time
Take Your Delivery Management Career to the Next Level.Do you have a passion for project delivery? Our Delivery Management professionals are involved in project delivery from initiation, planning, ...Show moreLast updated: 10 days ago
Educational Pipeline Program Support Teacher

Educational Pipeline Program Support Teacher

Trustees of University of PennsylvaniaNetter Center for Community Partnership
$30.00 hourly
Part-time
Founded in 1992, the Barbara and Edward Netter Center for Community Partnerships is the University's primary vehicle for advancing civic and community engagement at Penn. It brings together the reso...Show moreLast updated: 30+ days ago
Digital Campaign Manager (Pipeline Posting)

Digital Campaign Manager (Pipeline Posting)

Audacy, Inc.San Francisco, CA, USA
$50,000.00–$55,000.00 yearly
This is the ideal role for a high caliber-marketing professional with significant success in digital campaign management who is looking to join a growing, fast-paced business.As a Digital Campaign ...Show moreLast updated: 30+ days ago
  • Promoted
Engineer

Engineer

LassieSan Francisco, CA, US
Full-time
Doctors learn medicine — not business — and shouldn't have to be experts at both.There are 1 million doctors in the US, and most aspire to be independent. But as their business is st...Show moreLast updated: 4 days ago
  • Promoted
Pipeline Software Engineer

Pipeline Software Engineer

Aechelon Technology IncSan Francisco, CA, United States
$105,000.00–$180,000.00 yearly
D content in Geospecific visual / sensor databases and realistic 3D models.We seek people who share our passion for real-time computer graphics and commitment to our mission of helping make our Natio...Show moreLast updated: 30+ days ago
  • Promoted
RN - TELE

RN - TELE

PIPELINE - COAST PLAZA HOSPITALCA, United States
Full-time
PIPELINE - COAST PLAZA HOSPITAL.Show moreLast updated: 2 days ago
Bioinformatics Pipeline Engineer

Bioinformatics Pipeline Engineer

Recruiting from Scratchsan francisco, CA, United States
9 days ago
Salary
$155,000.00–$200,000.00 yearly
Job type
  • Full-time
Job description

Who is Recruiting from Scratch :

Recruiting from Scratch is a talent firm that focuses on placing the best candidate for our clients. Our team is 100% remote and we work with teams across North America, South America, and Europe to help them hire.

https : / / www.recruitingfromscratch.com /

Bioinformatics Pipeline Engineer

Location : South San Francisco, CA

Company Stage : Series A Biotech Company

Office Type : Onsite

Salary Range : $155,000 - $200,000 + Equity

About The Company

Our client is a rapidly growing, venture-backed biotech company revolutionizing DNA sequencing services. Their innovative technology enables overnight sequencing of whole plasmids, bacterial genomes, and colonies without primers or minipreps. With a global network of labs and thousands of daily users including leading scientists and biotech innovators, they're accelerating scientific discoveries that contribute to a healthier planet.

What You Will Do

  • Design and develop robust bioinformatics pipelines focusing on Oxford Nanopore sequencing data
  • Drive optimization of pipeline performance, reliability, and scalability using industry best practices
  • Collaborate with cross-functional teams of scientists and engineers to implement specific pipeline goals
  • Troubleshoot complex biological and sequencing artifacts while maintaining high coding standards
  • Provide technical leadership in pipeline usage and support training initiatives
  • Evaluate and integrate cutting-edge bioinformatics tools to enhance pipeline capabilities

Ideal Candidate Background

  • 3+ years of experience developing production-grade bioinformatics pipelines
  • Advanced degree in Bioinformatics, Biostatistics, or related field
  • Strong foundation in workflow languages, particularly Snakemake or Nextflow
  • Hands-on experience with Oxford Nanopore and Illumina sequencing technologies
  • Demonstrated expertise in Python, Bash, Conda, AWS, and GitHub Actions
  • Track record of building and optimizing pipelines for commercial applications
  • Preferred Qualifications

  • Experience with Docker / Apptainer / Singularity containerization
  • AWS cloud infrastructure knowledge (Lambda, S3, RDS)
  • Background in developing REST APIs
  • Experience in a fast-paced biotech environment
  • Compensation & Benefits

  • Competitive salary range : $155,000 - $200,000
  • Equity through Employee Stock Options
  • Comprehensive health, dental, and vision coverage
  • 401(k) with company matching
  • 4 weeks PTO + 10 paid holidays
  • Mental health benefits and gym membership
  • Professional development opportunities
  • Join a dynamic team that's pushing the boundaries of DNA sequencing technology. This role offers the opportunity to make a significant impact in a rapidly growing field while working with cutting-edge technologies.